A collection of awesome Perl-based bioinformatics tools
- Circos [http://circos.ca] Circos is a software package for visualizing data and information.
- MAKER [http://www.yandell-lab.org/software/maker.html] MAKER is a portable and easily configurable genome annotation pipeline.
- AliTV-perl-interface [https://github.com/AliTVTeam/AliTV-perl-interface/] Visualize multiple whole genome alignments as circular or linear maps
- LTR_retriever/LAI [https://github.com/oushujun/LTR_retriever] LTR_retriever is a highly accurate and sensitive program for identification of LTR retrotransposons; The LTR Assembly Index (LAI) is also included in this package.
- ViewBS [https://github.com/xie186/ViewBS] ViewBS - a powerful toolkit for visualization of high-throughput bisulfite sequencing data